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AT2G03410 AT2G03410 AT5G63070 AT5G63070 AT5G37150 AT5G37150 AT5G52090 AT5G52090 BGLU12 BGLU12 AT5G66830 AT5G66830 AT1G53345 AT1G53345 TRFL5 TRFL5 AT5G28220 AT5G28220 AT5G28210 AT5G28210 AT4G02930 AT4G02930
"AT1G53345" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G53345Uncharacterized protein (325 aa)    
Predicted Functional Partners:
AT4G02930
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (454 aa)
     
   
  0.680
AT5G66830
Putative F-box protein (394 aa)
           
  0.670
AT5G63070
40S ribosomal protein S15-6 (160 aa)
           
  0.670
AT2G03410
MO25-like protein (348 aa)
           
  0.670
TRFL5
TRF-like 5 (390 aa)
     
   
  0.652
AT5G28220
O-linked GlcNAc transferase-like protein (316 aa)
     
   
  0.649
AT5G52090
tRNA-splicing endonuclease positive effector-related protein (676 aa)
           
  0.637
BGLU12
Beta glucosidase 12 (507 aa)
           
  0.637
AT5G37150
DEXDc and putative helicase domain-containing protein (839 aa)
           
  0.637
AT5G28210
mRNA capping enzyme family protein (625 aa)
           
  0.637
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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