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XTH15 XTH15 PHYA PHYA MPK17 MPK17 AT1G53450 AT1G53450 AT5G51150 AT5G51150 BBX17 BBX17 AT2G17036 AT2G17036 AT3G09160 AT3G09160
"AT1G53450" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G53450Uncharacterized protein (453 aa)    
Predicted Functional Partners:
BBX17
B-box domain protein 17 (326 aa)
     
        0.437
PHYA
Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenetic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reduc [...] (1122 aa)
     
        0.437
AT2G17036
F-box-like protein (428 aa)
     
        0.435
MPK17
MAP kinase 17 (486 aa)
     
        0.435
XTH15
Xyloglucan-xyloglucosyl transferase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Has a high XET activity, but little or no XEH activity in vitro. Acceptor preferences are XXXGol > XLLGol = XLFGol > XXLGol > XXFGol (289 aa)
     
        0.432
AT3G09160
RNA recognition motif-containing protein (132 aa)
     
        0.428
AT5G51150
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (531 aa)
     
        0.400
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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