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AT3G51915 AT3G51915 AT1G53543 AT1G53543 AT3G54804 AT3G54804 AT1G53550 AT1G53550 AT1G02590 AT1G02590 AT1G59865 AT1G59865 AT2G19300 AT2G19300 AT2G33655 AT2G33655
"AT1G53550" - F-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G53550F-box family protein (408 aa)    
Predicted Functional Partners:
AT3G54804
Uncharacterized protein (34 aa)
     
        0.438
AT2G33655
Putative F-box protein (150 aa)
     
        0.438
AT2G19300
Uncharacterized protein (59 aa)
     
        0.438
AT3G51915
Uncharacterized protein (60 aa)
     
        0.437
AT1G59865
Uncharacterized protein (175 aa)
     
        0.437
AT1G53543
Uncharacterized protein (51 aa)
     
        0.437
AT1G02590
Putative aldehyde oxidase (89 aa)
     
        0.417
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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