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AT5G20045 AT5G20045 AT5G58784 AT5G58784 AT5G55110 AT5G55110 AT5G57400 AT5G57400 AT5G57500 AT5G57500 AT5G60530 AT5G60530 RTFL9 RTFL9 AT5G54370 AT5G54370 AT5G15940 AT5G15940 AT5G51520 AT5G51520 AT5G24070 AT5G24070
"RTFL9" - ROTUNDIFOLIA like 9 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTFL9ROTUNDIFOLIA like 9 (109 aa)    
Predicted Functional Partners:
AT5G60530
Late embryogenesis abundant protein-like protein (439 aa)
     
        0.438
AT5G58784
Dehydrodolichyl diphosphate synthase 5; Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein (302 aa)
     
        0.438
AT5G57500
Galactosyltransferase family protein (318 aa)
     
        0.438
AT5G57400
Uncharacterized protein (155 aa)
     
        0.438
AT5G55110
Stigma-specific Stig1 family protein (163 aa)
     
        0.438
AT5G54370
Late embryogenesis abundant protein-like protein (337 aa)
     
        0.438
AT5G51520
Plant invertase/pectin methylesterase inhibitor superfamily protein (204 aa)
     
        0.438
AT5G24070
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (Probable). The enzyme activity has to be proved (340 aa)
     
        0.438
AT5G20045
Uncharacterized protein (77 aa)
     
        0.438
AT5G15940
NAD(P)-binding Rossmann-fold superfamily protein (364 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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