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KAK KAK AT1G53935 AT1G53935 UPL4 UPL4 AT1G53930 AT1G53930 AT2G17360 AT2G17360 EMB3010 EMB3010 AT5G58420 AT5G58420 AT5G07090 AT5G07090 RPS6A RPS6A AT4G34670 AT4G34670 AT3G04840 AT3G04840
"AT1G53930" - Ubiquitin-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G53930Ubiquitin-like protein (158 aa)    
Predicted Functional Partners:
AT1G53935
Uncharacterized protein (165 aa)
           
  0.987
UPL4
Ubiquitin-protein ligase 4; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins (1502 aa)
       
 
  0.944
KAK
KAKTUS; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes (1888 aa)
       
 
  0.944
AT4G34670
Ribosomal protein S3Ae (262 aa)
     
 
  0.933
AT3G04840
Ribosomal protein S3Ae (262 aa)
     
 
  0.933
EMB3010
Embryo defective 3010; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (249 aa)
     
 
  0.931
RPS6A
Ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (250 aa)
     
 
  0.931
AT5G58420
40S ribosomal protein S4-3 (262 aa)
     
 
  0.930
AT5G07090
40S ribosomal protein S4-2 (262 aa)
     
 
  0.930
AT2G17360
40S ribosomal protein S4-1 (261 aa)
     
 
  0.930
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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