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SHA SHA AT1G76630 AT1G76630 SHA1 SHA1 ATBRXL2 ATBRXL2 SLP3 SLP3 BRX-LIKE3 BRX-LIKE3 NET1A NET1A MAP70-3 MAP70-3 T7P1.1 T7P1.1 SUVR1 SUVR1
"BRX-LIKE3" - BREVIS RADIX-like 3 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRX-LIKE3BREVIS RADIX-like 3 (370 aa)    
Predicted Functional Partners:
AT1G76630
Superkiller protein 3-like protein; Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C) (1168 aa)
     
   
  0.647
SHA
SH2 domain protein A (651 aa)
     
   
  0.577
T7P1.1
ARF-GAP domain 2; Probable GTPase-activating protein (776 aa)
     
        0.436
MAP70-3
Microtubule-associated proteins 70-3; Plant-specific protein that interact with microtubules (630 aa)
     
        0.431
SHA1
Shoot apical meristem arrest 1 (367 aa)
           
  0.429
SUVR1
Homolog of SU(var)3-9 1; Probable inactive histone-lysine methyltransferase that acts as regulator of transctiptional gene silencing independently of histone H3K9 methylation. Contributes to transcriptional gene silencing at RNA-directed DNA methylation (RdDM) target loci but also at RdDM-independent target loci (734 aa)
     
        0.427
ATBRXL2
Protein Brevis radix-like 2 (374 aa)
     
   
0.411
SLP3
Subtilisin-like serine protease 3 (815 aa)
     
        0.410
NET1A
Networked 1A; Plant-specific actin binding protein. Associates with F- actin at the plasma membrane and plasmodesmata. May be part of a membrane-cytoskeletal adapter complex (1728 aa)
     
        0.408
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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