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AT5G10660 AT5G10660 AT5G58880 AT5G58880 ACT4 ACT4 MAP65-9 MAP65-9 AT5G15040 AT5G15040 AT5G39870 AT5G39870 GNL2 GNL2 AT5G51030 AT5G51030 AT5G38760 AT5G38760 AT1G54240 AT1G54240 AT5G46200 AT5G46200
"AT1G54240" - Winged-helix DNA-binding transcription factor family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G54240Winged-helix DNA-binding transcription factor family protein (229 aa)    
Predicted Functional Partners:
MAP65-9
Microtubule-associated protein 65-9 (549 aa)
     
        0.438
ACT4
Actin 4; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins (377 aa)
     
        0.438
AT5G58880
Uncharacterized protein (1088 aa)
     
        0.438
AT5G51030
NAD(P)-binding Rossmann-fold superfamily protein (314 aa)
     
        0.438
AT5G46200
Uncharacterized protein (408 aa)
     
        0.438
AT5G39870
Uncharacterized protein (290 aa)
     
        0.438
AT5G38760
Late embryogenesis abundant protein (LEA) family protein (67 aa)
     
        0.438
GNL2
GNOM-like 2; Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Essential for pollen germination (1375 aa)
     
        0.438
AT5G15040
Paired amphipathic helix repeat-containing protein (87 aa)
     
        0.438
AT5G10660
Calmodulin-binding protein-related (452 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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