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TT2 TT2 RPP27 RPP27 AT1G53815 AT1G53815 AT5G28288 AT5G28288 RLP9 RLP9 AT2G27410 AT2G27410 AT1G54445 AT1G54445 AT2G13542 AT2G13542 AT1G57790 AT1G57790 AT1G57550 AT1G57550 AT1G56553 AT1G56553
"AT1G54445" - Defensin-like protein 90 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G54445Defensin-like protein 90 (78 aa)    
Predicted Functional Partners:
AT5G28288
Putative defensin-like protein 101 (84 aa)
           
  0.863
AT2G13542
Putative defensin-like protein 62 (76 aa)
           
  0.803
AT1G53815
F-box protein (237 aa)
           
  0.737
AT1G57790
F-box protein (352 aa)
           
  0.731
AT1G56553
Defensin-like protein 199 (84 aa)
     
   
  0.704
AT2G27410
Uncharacterized protein (257 aa)
           
  0.671
RPP27
Putative disease resistance protein (957 aa)
           
  0.608
AT1G57550
Low temperature and salt responsive protein (52 aa)
           
  0.600
RLP9
Receptor like protein 9 (1029 aa)
           
  0.501
TT2
TRANSPARENT TESTA 2; Transcription activator, when associated with BHLH2/EGL3/MYC146, BHLH12/MYC1, or BHLH42/TT8. Involved in the control of flavonoid late metabolism in developing siliques. Plays a key role in determining the tissue-specific activation of leucoanthocyanidin reductase (BANYULS) (258 aa)
     
   
  0.475
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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