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ECS1 ECS1 GLN1;4 GLN1;4 FLS5 FLS5 APP1 APP1 AT1G54650 AT1G54650 SERK5 SERK5 MYB305 MYB305 COBL5 COBL5 PXMT1 PXMT1 XTH8 XTH8
"AT1G54650" - Methyltransferase family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G54650Methyltransferase family protein (301 aa)    
Predicted Functional Partners:
PXMT1
S-adenosylmethionine-dependent methyltransferase domain-containing protein (353 aa)
           
  0.608
COBL5
COBRA-like protein 5 (204 aa)
           
  0.505
FLS5
Flavonol synthase 5 (326 aa)
           
  0.503
APP1
Aminopeptidase P1 (645 aa)
           
  0.491
XTH8
Xyloglucan-xyloglucosyl transferase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity) (305 aa)
           
  0.448
GLN1;4
Glutamine synthetase 1;4; High-affinity glutamine synthetase. May contribute to the homeostatic control of glutamine synthesis in roots (356 aa)
           
  0.420
ECS1
Protein ECS1 (95 aa)
           
  0.420
SERK5
Somatic embryogenesis receptor kinase 5; Serine/threonine-kinase of unknown function (601 aa)
           
  0.420
MYB305
Myb domain protein 305 (269 aa)
           
  0.405
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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