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ACR9 ACR9 BXL1 BXL1 AT1G54740 AT1G54740 PP2-A13 PP2-A13 AT2G20670 AT2G20670 AKINBETA1 AKINBETA1 AT5G22920 AT5G22920 AT4G01330 AT4G01330 AT3G49790 AT3G49790
"AT1G54740" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G54740Uncharacterized protein (299 aa)    
Predicted Functional Partners:
AT2G20670
Uncharacterized protein (294 aa)
     
        0.601
AKINBETA1
SNF1-related protein kinase regulatory subunit beta-1 (320 aa)
     
        0.570
ACR9
ACT domain repeats 9; May bind amino acids (411 aa)
     
        0.565
AT4G01330
Protein kinase family protein (480 aa)
     
        0.492
BXL1
Beta-xylosidase 1; Involved in pectic arabinan modification in mucilage secretory cells. Acts also as a beta-D-xylosidase during the remodeling of xylans in vascular development (774 aa)
     
        0.472
AT5G22920
CHY-type/CTCHY-type/RING-type Zinc finger protein (291 aa)
     
        0.456
AT3G49790
Carbohydrate-binding protein (366 aa)
     
        0.440
PP2-A13
Phloem protein 2-A13; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (291 aa)
     
        0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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