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EXT6 EXT6 RHS19 RHS19 EXT13 EXT13 PRP1 PRP1 XTH12 XTH12 EXT10 EXT10 EXPA18 EXPA18 PRP3 PRP3 RHS18 RHS18 AT3G49960 AT3G49960 AGP3 AGP3
"PRP1" - Proline-rich protein 1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
PRP1Proline-rich protein 1; May contribute to cell wall structure in root hairs (335 aa)    
Predicted Functional Partners:
RHS19
Peroxidase 73; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue (329 aa)
     
   
  0.879
XTH12
Xyloglucan-xyloglucosyl transferase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity) (285 aa)
     
   
  0.865
AT3G49960
Peroxidase 35; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue (329 aa)
     
   
  0.845
EXT6
Extensin 6 (559 aa)
     
   
  0.830
AGP3
Arabinogalactan protein 3; Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death (139 aa)
     
   
  0.820
PRP3
Proline-rich protein; May contribute to cell wall structure in root hairs (313 aa)
     
   
0.819
EXT13
Extensin 13 (328 aa)
     
   
  0.816
EXT10
Extensin 10 (689 aa)
     
   
  0.804
EXPA18
Expansin A18; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity) (257 aa)
     
   
  0.804
RHS18
Peroxidase 60; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue (331 aa)
     
   
  0.798
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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