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SHB1 SHB1 AT5G27880 AT5G27880 IKU1 IKU1 AGL62 AGL62 IKU2 IKU2 WRKY10 WRKY10 PFT1 PFT1 FIE FIE FIS2 FIS2 MEA MEA emb1381 emb1381
"WRKY10" - WRKY DNA-binding protein 10 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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WRKY10WRKY DNA-binding protein 10; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity). Modulates seed size by negatively regulating the cellularization of syncytial endosperm (PubMed-16293693) (485 aa)    
Predicted Functional Partners:
IKU2
HAIKU2; Modulates the seed size by negatively regulating the cellularization of syncytial endosperm (991 aa)
           
  0.987
IKU1
HAIKU1; Modulates seed size by negatively regulating the cellularization of syncytial endosperm (PubMed-12692325, PubMed-20545893). May function by binding and modulating the activity of WRKY10 transcription factor (PubMed-20545893) (402 aa)
           
  0.953
SHB1
SHORT HYPOCOTYL UNDER BLUE1; May transport inorganic phosphate (Pi) (745 aa)
           
  0.945
PFT1
PHYTOCHROME AND FLOWERING TIME 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Positive regulator of shade avoidance and of ja [...] (836 aa)
       
 
  0.740
AGL62
AGAMOUS-like 62; Probable transcription factor. Required for suppression of cellularization and promotion of nuclear proliferation during early endosperm development. The FERTILIZATION-INDEPENDENT SEED (FIS) polycomb complex is required for suppression of ALG62 expression at the end of the syncytial phase of endosperm development (299 aa)
     
   
  0.689
FIS2
FERTILIZATION INDEPENDENT SEED 2; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Required to prevent the proliferation of the central cell by repressing unknown target genes before fertilization. Regulates the anteroposterio [...] (755 aa)
           
  0.672
FIE
FERTILIZATION-INDEPENDENT ENDOSPERM; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Required to prevent the proliferation of the central cell by repressing unknown target genes before fertilization. Probably also involved in [...] (369 aa)
           
  0.670
MEA
MEDEA; Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates ’Lys-27’ of histone H3, leading to transcriptional repression of the affected target genes. Required to prevent the proliferation of the central cell of the female gametophyte by repressing target genes before fertilization. After fertilization, it probably also regulates the embryo and endosperm proliferation and anteroposterior organization during seed development. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive [...] (689 aa)
           
  0.645
AT5G27880
C2H2 and C2HC zinc finger-containing protein (278 aa)
     
   
  0.625
emb1381
Embryo defective 1381 (559 aa)
           
  0.610
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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