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AT4G30320 AT4G30320 AT1G16230 AT1G16230 PRA1.G1 PRA1.G1 AT1G16225 AT1G16225 SYP51 SYP51 SYP61 SYP61 SYP52 SYP52
"PRA1.G1" - PRA1 family protein G1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRA1.G1PRA1 family protein G1; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments (187 aa)    
Predicted Functional Partners:
SYP52
Syntaxin-52; Vesicle trafficking protein that functions in the secretory pathway (233 aa)
       
      0.489
SYP61
Syntaxin-61; Vesicle trafficking protein that functions in the secretory pathway. Involved in osmotic stress tolerance and in abscisic acid (ABA) regulation of stomatal responses (245 aa)
       
      0.489
SYP51
Syntaxin-51; Vesicle trafficking protein that functions in the secretory pathway (232 aa)
       
      0.489
AT1G16230
Syntaxin of plants SYP5 (193 aa)
       
      0.489
AT1G16225
Putative syntaxin-type t-SNARE protein (199 aa)
       
      0.489
AT4G30320
Allergen V5/Tpx-1-related family protein (161 aa)
     
        0.435
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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