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AT1G57720 AT1G57720 AT1G09640 AT1G09640 AT1G56050 AT1G56050 AT3G28460 AT3G28460 AT5G55220 AT5G55220 AT3G58140 AT3G58140 RRF RRF FLN2 FLN2 AT3G12930 AT3G12930 AT5G66470 AT5G66470 At3g17170 At3g17170
"AT1G56050" - GTP-binding protein-related in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G56050GTP-binding protein-related; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP (421 aa)    
Predicted Functional Partners:
AT1G57720
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
      0.932
AT1G09640
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (414 aa)
     
      0.932
AT3G12930
Lojap-related protein; May be a ribosome silencing factor (Potential). Involved in plastid biogenesis (By similarity) (238 aa)
   
   
  0.901
At3g17170
REGULATOR OF FATTY-ACID COMPOSITION 3 (314 aa)
   
 
    0.879
AT5G55220
Trigger factor type chaperone family protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (By similarity) (547 aa)
     
   
  0.871
AT5G66470
GTP-binding protein Era (427 aa)
   
   
  0.858
FLN2
Fructokinase-like 2; Required for proper chloroplast development, most likely through regulating plastid-encoded polymerase (PEP) dependent chloroplast transcription. Acts as a component of the transcriptionally active plastid chromosome that is required for plastid gene expression (616 aa)
   
   
  0.851
RRF
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of chloroplastic protein biosynthesis (275 aa)
   
   
  0.847
AT3G58140
phenylalanyl-tRNA synthetase; Is responsible for the charging of tRNA(Phe) with phenylalanine in mitochondrial translation (429 aa)
   
   
  0.845
AT3G28460
Methyltransferase (314 aa)
   
   
  0.845
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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