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AT1G69070 AT1G69070 TOZ TOZ AT4G04940 AT4G04940 FIB2 FIB2 AT4G28450 AT4G28450 FIB1 FIB1 NOP56 NOP56 AT1G06720 AT1G06720 AT3G21540 AT3G21540 AT3G11964 AT3G11964 AT3G05060 AT3G05060
NOP56-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP56NOP56-like protein (522 aa)    
Predicted Functional Partners:
FIB2
Fibrillarin 2; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre- initiation complex with RNA polymerase II and the general transcription factors (320 aa)
 
  0.999
AT3G21540
transducin/WD40 domain-containing protein (955 aa)
     
  0.999
FIB1
Fibrillarin 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre- initiation complex with RNA polymerase II and the general transcription factors (By similarity) (308 aa)
 
  0.999
AT1G06720
BMS1 and NUC121 domain-containing protein (1147 aa)
     
  0.999
TOZ
TORMOZEMBRYO DEFECTIVE (876 aa)
     
  0.999
AT3G05060
Putative nucleolar protein 5-2; Required for 60S ribosomal subunit biogenesis (533 aa)
   
0.999
AT1G69070
Uncharacterized protein (901 aa)
     
  0.999
AT4G04940
transducin/WD40 domain-containing protein (910 aa)
     
  0.999
AT3G11964
RNA binding protein; Involved in the biogenesis of ribosomal RNA (rRNA). Required for the formation of 5.8S rRNA. Required for normal development of female gametophytes (1896 aa)
     
  0.999
AT4G28450
WD repeat and SOF domain-containing protein 1 (452 aa)
     
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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