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RPL3P RPL3P EMB2207 EMB2207 RPS18 RPS18 AT4G39880 AT4G39880 AT3G01790 AT3G01790 AT5G48760 AT5G48760 AT1G07210 AT1G07210 AT1G07830 AT1G07830 RPL3B RPL3B AT1G56350 AT1G56350 AT2G43030 AT2G43030
"AT1G56350" - Peptide chain release factor 2 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
AT1G56350Peptide chain release factor 2; Directs the termination of translation in response to the peptide chain termination codon UGA. Required for the proper translation, stability and normal processing of UGA-containing polycistronic transcripts in chloroplasts (482 aa)    
Predicted Functional Partners:
AT4G39880
Ribosomal protein L23/L15e family protein (178 aa)
     
      0.923
AT1G07830
Ribosomal protein L29 family protein (144 aa)
     
      0.911
RPS18
Ribosomal protein S18 (101 aa)
   
 
  0.895
AT1G07210
Ribosomal protein S18 (261 aa)
   
 
  0.895
AT3G01790
Large subunit ribosomal protein L13 (205 aa)
 
 
  0.880
RPL3P
50S ribosomal protein L3-2; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (324 aa)
     
 
  0.880
AT2G43030
50S ribosomal protein L3-1; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (271 aa)
     
 
  0.873
RPL3B
R-protein L3 B (390 aa)
     
 
  0.873
EMB2207
Ribosomal protein 1 (389 aa)
     
 
  0.873
AT5G48760
60S ribosomal protein L13a-4 (206 aa)
   
 
  0.856
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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