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STRINGSTRING
AT5G20950 AT5G20950 BXL1 BXL1 IPS1 IPS1 XYL4 XYL4 PAP6 PAP6 AT4G29530 AT4G29530 AT5G20940 AT5G20940 KUOX1 KUOX1 HCEF1 HCEF1 TH1 TH1 TOPII TOPII
"PAP6" - Purple acid phosphatase 6 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAP6Purple acid phosphatase 6 (466 aa)    
Predicted Functional Partners:
AT4G29530
Pyridoxal phosphate phosphatase-related protein; Catalyzes the specific cleavage of pyrophosphate (245 aa)
           
  0.922
KUOX1
KAR-UP oxidoreductase 1 (340 aa)
           
  0.670
TOPII
Topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1473 aa)
         
  0.661
TH1
THIAMINE REQUIRING 1; Essential for thiamine biosynthesis. Bifunctional enzyme that catalyzes the phosphorylation of hydroxymethylpyrimidine phosphate (HMP-P) to HMP-PP and condenses 4-methyl-5-(beta- hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino- 5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (522 aa)
       
    0.590
IPS1
INDUCED BY PHOSPHATE STARVATION1 (80 aa)
           
  0.558
HCEF1
Fructose-1,6-bisphosphatase (417 aa)
           
  0.557
XYL4
beta-D-xylosidase 4; Beta-D-xylosidase showing an optimal efficiency with the natural substrate xylobiose (784 aa)
     
 
  0.536
BXL1
Beta-xylosidase 1; Involved in pectic arabinan modification in mucilage secretory cells. Acts also as a beta-D-xylosidase during the remodeling of xylans in vascular development (774 aa)
     
 
  0.536
AT5G20950
Glycosyl hydrolase family protein (624 aa)
     
 
  0.536
AT5G20940
Glycosyl hydrolase family protein (626 aa)
     
 
  0.536
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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