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STRINGSTRING
AT5G03230 AT5G03230 AT1G57770 AT1G57770 PSY PSY G4 G4 SQS2 SQS2 PDS3 PDS3 ALB1 ALB1 AT1G62730 AT1G62730 SQS1 SQS1 ZDS ZDS At3g11945 At3g11945
"AT1G57770" - FAD/NAD(P)-binding oxidoreductase family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G57770FAD/NAD(P)-binding oxidoreductase family protein (574 aa)    
Predicted Functional Partners:
PSY
PHYTOENE SYNTHASE; Catalyzes the reaction from prephytoene diphosphate to phytoene (437 aa)
 
 
  0.887
G4
Chlorophyll synthase; Involved in one of the last steps of the biosynthesis of chlorophyll a. Catalyzes the esterification of chlorophillide a or b with a preference for geranylgeranyldiphosphate (GGPP) rather than for phytyldiphosphate (PhyPP) (387 aa)
 
   
  0.830
SQS2
Squalene synthase 2 (413 aa)
   
 
  0.811
SQS1
Squalene synthase (410 aa)
   
 
  0.811
AT1G62730
Terpenoid synthases superfamily protein (304 aa)
   
 
  0.811
ZDS
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’. Shows stereoselectivity toward trans C15- C15’zeta-carotene double bond. The zeta-carotene produced by the phytoene desaturase PDS has a C15-C15’ double bond in the cis configuration and it requires isomerization before being recognized as substrate by ZDS. The main product is 7,9,7’,9’- tetra-cis-lycopene (pro-lycopene) (558 aa)
 
 
  0.795
PDS3
Phytoene desaturase 3; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene. The zeta-carotene produced has a central C15-C15’ double bond in the cis configuration and it requires isomerization before being recognized as substrate by ZDS, the next enzyme in the lycopene biosynthesis pathway (566 aa)
 
 
  0.758
ALB1
ALBINA 1; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX. The magnesium-chelatase is a complex of three subunits, CHLI, CHLD and CHLH. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP- dependent chelation step. Does not bind abscisic acid (760 aa)
   
   
  0.746
At3g11945
Homogentisate prenyltransferase (393 aa)
 
   
  0.731
AT5G03230
Uncharacterized protein (166 aa)
           
  0.674
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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