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SGF29a SGF29a TAF7 TAF7 AT1G58025 AT1G58025 SDG14 SDG14 SWI3B SWI3B ATX2 ATX2 TOPII TOPII SDG29 SDG29 SET27 SET27 SDG16 SDG16 AT2G47210 AT2G47210
"AT1G58025" - DNA-binding bromodomain-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G58025DNA-binding bromodomain-containing protein (582 aa)    
Predicted Functional Partners:
AT2G47210
DNA methyltransferase 1-associated protein 1; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A (441 aa)
     
 
  0.896
TAF7
TBP-associated factor 7; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription (239 aa)
     
 
  0.843
TOPII
Topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1473 aa)
     
  0.815
SDG29
SET domain group 29; Histone methyltransferase (1043 aa)
     
 
  0.810
SDG14
SET domain protein 14; Histone methyltransferase (1018 aa)
     
 
  0.781
SET27
Homologue of trithorax; Histone methyltransferase. Methylates ’Lys-4’ of histone H3. H3 ’Lys-4’ methylation represents a specific tag for epigenetic transcriptional activation. Required to maintain the active state of class A (AP1 and AP2), class B (PI and AP3) and class C (AG) floral homeotic genes at early stages of flower development. Regulates floral organ identity and flowering transition. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity (1062 aa)
     
 
  0.781
SDG16
SET domain protein 16; Histone methyltransferase (1027 aa)
     
 
  0.775
SWI3B
Switch subunit 3; Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors. May play an essential role in the transition from the vegetative to the reproductive phase of development. May be a positive regul [...] (469 aa)
     
  0.768
ATX2
Trithorax-like protein 2; Histone methyltransferase (1083 aa)
     
 
  0.767
SGF29a
SGF29 tudor-like domain (270 aa)
     
 
  0.752
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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