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AT4G09420 AT4G09420 CAP1 CAP1 AT1G58400 AT1G58400 SGT1B SGT1B AT5G06520 AT5G06520 AT2G20050 AT2G20050 RLP9 RLP9 SHD SHD AT3G26560 AT3G26560 AT2G40860 AT2G40860 AT1G53815 AT1G53815
"RLP9" - Receptor like protein 9 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RLP9Receptor like protein 9 (1029 aa)    
Predicted Functional Partners:
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (1094 aa)
     
 
  0.972
CAP1
CYCLASE ASSOCIATED PROTEIN; Actin monomer binding protein that accelerates the exchange of ADP for ATP. Regulates the pool of unpolymerized ATP- actin. Key intermediate between actin-depolymerizing factor (ADF)- mediated disassembly and the profilin-based nucleation and elongation machinery (476 aa)
       
 
  0.756
SGT1B
Phosphatase SGT1b; Involved in plant innate immunity. Is essential for resistance conferred by multiple R genes recognizing different oomycete pathogen isolates like avirulent H.parasitica (downy mildew). Contributes additively with RAR1 to RPP5-dependent resistance. Not required for RPM1, RPS2, RPS4 and RPS5-mediated resistance. Functions as negative regulator of RPS5 accumulation by assisting its degradation. May be involved in heat shock response by associating with HSC70-1 chaperone. Required for the SCF(TIR1)-mediated degradation of Aux/IAA proteins, but maybe not for SCF(TIR1) as [...] (358 aa)
       
 
  0.730
AT5G06520
SWAP/Surp domain-containing protein (679 aa)
       
 
  0.707
AT2G40860
Putative protein phosphatase 2C 31 (658 aa)
     
  0.693
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
       
 
  0.689
AT1G53815
F-box protein (237 aa)
           
  0.672
SHD
SHEPHERD; May have a molecular chaperone role in the processing of secreted materials. Required for shoot apical meristem (SAM), root apical meristem (RAM) and floral meristem (FM) formation, probably by regulating the folding of CLAVATA proteins (CLVs). Also involved in pollen tube elongation (PubMed-11867518). Involved in resistance to tunicamycin- or high calcium-induced ER stresses. Possesses ATPase activity (PubMed-25297550) (823 aa)
       
 
  0.670
AT4G09420
Disease resistance protein (TIR-NBS class) (457 aa)
           
  0.670
AT1G58400
CC-NBS-LRR class disease resistance protein; Potential disease resistance protein (900 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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