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CYTC-2 CYTC-2 HON5 HON5 AT4G09420 AT4G09420 AT5G06520 AT5G06520 AT1G73620 AT1G73620 AT1G58400 AT1G58400 AT3G26560 AT3G26560 CRK26 CRK26 WRKY36 WRKY36 AT2G40860 AT2G40860 CYTC-1 CYTC-1
"AT1G58400" - CC-NBS-LRR class disease resistance protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G58400CC-NBS-LRR class disease resistance protein; Potential disease resistance protein (900 aa)    
Predicted Functional Partners:
AT5G06520
SWAP/Surp domain-containing protein (679 aa)
       
 
  0.838
AT4G09420
Disease resistance protein (TIR-NBS class) (457 aa)
           
  0.808
WRKY36
WRKY DNA-binding protein 36; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (387 aa)
           
  0.780
CYTC-2
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
     
  0.745
CYTC-1
CYTOCHROME C-1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (114 aa)
     
  0.745
CRK26
Cysteine-rich receptor-like protein kinase 26 (665 aa)
     
  0.737
AT1G73620
Pathogenesis-related thaumatin-like protein (264 aa)
           
  0.710
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
       
 
  0.689
AT2G40860
Putative protein phosphatase 2C 31 (658 aa)
     
  0.687
HON5
High mobility group A5 (479 aa)
           
  0.679
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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