Full Link:
STRINGSTRING
RPP8 RPP8 RPP5 RPP5 PBS2 PBS2 BRU6 BRU6 CMPG1 CMPG1 CF9 CF9 TIR TIR RPM1 RPM1 PUB17 PUB17 AT3G15220 AT3G15220 RLP29 RLP29
"CF9" - Encodes CF9 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF9Encodes CF9 (381 aa)    
Predicted Functional Partners:
BRU6
Indole-3-acetic acid-amido synthetase GH3.2; Catalyzes the synthesis of indole-3-acetic acid (IAA)- amino acid conjugates, providing a mechanism for the plant to cope with the presence of excess auxin. Strongly reactive with Glu, Gln, Trp, Asp, Ala, Leu, Phe, Gly, Tyr, Met, Ile and Val. Little or no product formation with His, Ser, Thr, Arg, Lys, or Cys. Also active on pyruvic and butyric acid analogs of IAA, PAA and the synthetic auxin naphthaleneacetic acid (NAA). The two chlorinated synthetic auxin herbicides 2,4-D and 3,6-dichloro-o-anisic acid (dicamba) cannot be used as substrates (603 aa)
           
  0.960
RPM1
Disease resistance protein RPM1; Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. Acts via its interaction with RIN4, and probably triggers the plant resistance when RIN4 is phosphorylated by AvrRpm1. It is then degraded at the onset of th [...] (926 aa)
           
  0.863
RPP5
RECOGNITION OF PERONOSPORA PARASITICA 5; TIR-NB-LRR receptor-like protein that confers resistance to the pathogen Hyaloperonospora arabidopsis isolate Noco2 (downy mildew disease) (PubMed-9212464). Confers resistance to H.arabidopsis isolates Emoy2, Emwa1 and Noco2 (PubMed-11846877) (1449 aa)
           
  0.861
RLP29
Receptor like protein 29 (462 aa)
           
  0.736
AT3G15220
Putative protein kinase (690 aa)
           
  0.733
TIR
Toll/interleukin-1 receptor-like; Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (By similarity) (176 aa)
           
  0.731
RPP8
Disease resistance protein RPP8; Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth. The interaction with TIP (TCV-interacting protein) may be essential for the recognition of the avirulence proteins, and the triggering of the defense response. Triggers resistance to turnip crinkle virus (TCV) via a SAG101-dependent pathway (908 aa)
           
  0.679
PUB17
Plant U-box 17; Functions as an E3 ubiquitin ligase (729 aa)
           
  0.676
CMPG1
CYS, MET, PRO, and GLY protein 1; Functions as an E3 ubiquitin ligase (431 aa)
           
  0.671
PBS2
PPHB SUSCEPTIBLE 2; Required specifically for plant innate immunity. Is essential for resistance conferred by multiple R genes recognizing different bacterial and oomycete pathogen isolates like avirulent P.syringae or H.parasitica (downy mildew). Contributes additively with SGT1B to RPP5-dependent resistance. Functions as positive regulator of RPS5 accumulation by assisting its stabilization. May function as co-chaperone of HSP90-2 to positively regulate the steady-state accumulation of RPM1 and protect it from SGT1- mediated degradation. Acts as negative regulator of pathogen- associ [...] (226 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (1%)