Full Link:
STRINGSTRING
AT4G35220 AT4G35220 SBT1.6 SBT1.6 AT1G44542 AT1G44542 AGL6 AGL6 AT4G34180 AT4G34180 ZCF61 ZCF61 FBP7 FBP7 STK STK SLP3 SLP3 AT1G63250 AT1G63250 AT1G71370 AT1G71370
"ZCF61" - E3 Ubiquitin ligase family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCF61E3 Ubiquitin ligase family protein (338 aa)    
Predicted Functional Partners:
AT4G35220
Cyclase family protein (272 aa)
           
  0.736
AT4G34180
Cyclase family protein (255 aa)
           
  0.736
AT1G44542
Cyclase-like protein (271 aa)
           
  0.736
AT1G71370
DEAD-box ATP-dependent RNA helicase 49 (558 aa)
           
  0.709
FBP7
F-box protein 7; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Required for efficient protein synthesis during temperature stress conditions (328 aa)
           
  0.670
AT1G63250
DEA(D/H)-box RNA helicase family protein (798 aa)
     
   
  0.641
SBT1.6
Subtilisin-like serine protease 2 (764 aa)
           
  0.632
AGL6
AGAMOUS-like 6; Probable transcription factor. Forms a heterodimer via the K-box domain with AG, that could be involved in genes regulation during floral meristem development (252 aa)
           
  0.603
SLP3
Subtilisin-like serine protease 3 (815 aa)
     
   
  0.577
STK
SEEDSTICK; Probable transcription factor (256 aa)
           
  0.557
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (1%)