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AT5G46490 AT5G46490 AT5G49220 AT5G49220 AT1G31550 AT1G31550 CYTC-2 CYTC-2 AT5G46520 AT5G46520 AT5G46510 AT5G46510 CW9 CW9 AT3G26560 AT3G26560 AT1G59630 AT1G59630 AT1G72840 AT1G72840 CYTC-1 CYTC-1
"CW9" - Encodes CW9 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CW9Encodes CW9 (842 aa)    
Predicted Functional Partners:
AT1G31550
GDSL esterase/lipase (394 aa)
           
  0.810
AT5G49220
Uncharacterized protein (409 aa)
           
  0.806
AT1G59630
F-box associated ubiquitination effector family protein (239 aa)
           
  0.748
CYTC-2
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
     
  0.745
CYTC-1
CYTOCHROME C-1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (114 aa)
     
  0.745
AT1G72840
TIR-NBS-LRR class disease resistance protein (1183 aa)
           
  0.738
AT5G46510
TIR-NBS-LRR class disease resistance protein (1353 aa)
     
   
  0.722
AT5G46520
TIR-NBS-LRR class disease resistance protein; Disease resistance protein of the TIR-NB-LRR-type. Part of the RPS6 locus that contains a cluster of several paralogous disease resistance (R) genes. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via an indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (By similarity). Required for [5-(3,4-dichlorophenyl)furan-2-yl]-piperidine-1-ylmethanethione- (DFPM-) induced root growth arrest d [...] (1168 aa)
     
   
  0.709
AT5G46490
TIR-NBS-LRR class disease resistance protein (858 aa)
     
   
  0.703
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
       
 
  0.689
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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