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CYTC-2 CYTC-2 CYTC-1 CYTC-1 AT5G17680 AT5G17680 AT1G59780 AT1G59780 AT5G11250 AT5G11250 AT3G26560 AT3G26560 AT1G63740 AT1G63740 AT5G46530 AT5G46530 AT1G17600 AT1G17600 AT1G63730 AT1G63730 AT1G56540 AT1G56540
"AT1G59780" - NB-ARC domain-containing disease resistance protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G59780NB-ARC domain-containing disease resistance protein; Potential disease resistance protein (906 aa)    
Predicted Functional Partners:
AT5G46530
AWPM-19-like protein (157 aa)
           
  0.862
AT5G11250
TIR-NBS-LRR class disease resistance protein (1189 aa)
           
  0.808
AT1G56540
TIR-NBS-LRR class disease resistance protein (1096 aa)
           
  0.805
CYTC-2
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
     
  0.745
CYTC-1
CYTOCHROME C-1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (114 aa)
     
  0.745
AT5G17680
Putative TIR-NBS-LRR class disease resistance protein (1294 aa)
           
  0.739
AT1G63740
TIR-NBS-LRR class disease resistance protein (992 aa)
           
  0.738
AT1G63730
TIR-NBS-LRR class disease resistance protein (966 aa)
           
  0.735
AT1G17600
TIR-NBS-LRR class disease resistance protein (1049 aa)
           
  0.705
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
       
 
  0.689
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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