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AT2G21930 AT2G21930 AT5G47150 AT5G47150 AT5G03370 AT5G03370 AT1G69900 AT1G69900 AT3G22810 AT3G22810 AT4G32820 AT4G32820 AT1G59930 AT1G59930 AT5G66980 AT5G66980 AT5G59930 AT5G59930 AT3G26480 AT3G26480 AT3G10200 AT3G10200
"AT1G59930" - MADS-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G59930MADS-box family protein (132 aa)    
Predicted Functional Partners:
AT5G66980
Putative B3 domain-containing protein (334 aa)
           
  0.735
AT3G26480
transducin/WD40 domain-containing protein (764 aa)
           
  0.735
AT4G32820
Tetratricopeptide repeat domain-containing protein (1872 aa)
       
  0.723
AT5G59930
Cysteine/Histidine-rich C1 domain family protein (656 aa)
           
  0.709
AT3G10200
Putative methyltransferase PMT6 (591 aa)
           
  0.709
AT5G47150
YDG/SRA domain-containing protein (328 aa)
           
  0.634
AT5G03370
Acylphosphatase (171 aa)
           
  0.634
AT3G22810
Uncharacterized protein (472 aa)
           
  0.634
AT2G21930
F-box protein (335 aa)
           
  0.634
AT1G69900
Actin cross-linking protein (397 aa)
           
  0.634
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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