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AT5G46040 AT5G46040 AT4G21323 AT4G21323 AT1G26410 AT1G26410 PRP40B PRP40B AT4G05490 AT4G05490 AT1G59970 AT1G59970 AT4G16640 AT4G16640 AT1G24140 AT1G24140 AT1G69860 AT1G69860 AT2G45040 AT2G45040 MMP MMP
"AT1G59970" - Matrixin family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G59970Matrixin family protein; Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on Mca-KESAbuNLFVLKDpaR-NH(2) (QF75) and, to some extent, on McaPLGLDpaAR-NH(2) (QF24), myelin basic protein (MBP) and beta-casein (PubMed-24156403) (360 aa)    
Predicted Functional Partners:
AT4G16640
Matrixin family protein; Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (PubMed-10574937). Can cleave myelin basic protein as well as fluorigenic peptide substrates, McaPLANvaDpaAR-NH(2) and McaPChaGNvaHADpa-NH(2) 4-fold more efficiently than McaPLGLDpaAR- NH(2) (QF24) (PubMed-10574937). Active on myelin basic protein (MBP) and, to some extent, on McaPLGLDpaAR-NH(2) (QF24) and beta- casein (PubMed-24156403) (364 aa)
         
0.905
MMP
Matrix metalloproteinase; Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Required for plant growth, morphogenesis, and development with particular relevance for flowering and senescence (PubMed-11726650). Active on McaPLGLDpaAR-NH(2) (QF24) and myelin basic protein (MBP) and, to some extent, on beta-casein (PubMed-24156403) (378 aa)
         
0.903
AT2G45040
Matrixin family protein; Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on myelin basic protein (MBP) and, to some extent, on McaPLGLDpaAR-NH(2) (QF24) and beta-casein (PubMed-24156403) (342 aa)
         
0.902
AT1G24140
Matrixin family protein; Matrix metalloproteinases (MMPs) or matrixins may play a role in the degradation and remodeling of the extracellular matrix (ECM) during development or in response to stresses (By similarity). Active on McaPLGLDpaAR-NH(2) (QF24) and beta-casein and, to some extent, on myelin basic protein (MBP) (PubMed-24156403) (384 aa)
         
0.901
AT5G46040
Peptide transporter PTR3-B; Peptide transporter (586 aa)
           
  0.553
AT1G69860
Nitrate transporter 1 (555 aa)
           
  0.553
AT1G26410
FAD-binding Berberine family protein; Probable flavin-dependent oxidoreductase (552 aa)
           
  0.552
AT4G05490
RNI-like superfamily protein (307 aa)
           
  0.508
AT4G21323
Subtilase family protein (803 aa)
       
 
  0.504
PRP40B
pre-mRNA-processing protein 40B; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. I [...] (992 aa)
       
 
  0.478
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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