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AT5G49260 AT5G49260 APRR4 APRR4 AT5G56560 AT5G56560 BBX21 BBX21 BRM BRM SWI3B SWI3B BBX26 BBX26 SWI3C SWI3C LZF1 LZF1 BBX18 BBX18 STH STH
"BBX26" - B-box domain protein 26 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BBX26B-box domain protein 26 (251 aa)    
Predicted Functional Partners:
BBX18
B-box domain protein 18; Acts as negative regulator of seedling photomorphogenesis (PubMed-18540109). Acts as a negative regulator of blue light-mediated inhibition of hypocotyl elongation through increase of bioactive gibberellin levels (PubMed-20872270). Acts as a repressor of thermotolerance by modulating expression of a set of heat shock-responsive genes (PubMed-23238922) (172 aa)
           
  0.802
STH
Salt tolerance homologue; Acts as negative regulator of seedling photomorphogenesis (PubMed-18540109). BBX25/STH and BBX24/STO function as transcriptional corepressors of HY5 activity, leading to the down-regulation of BBX22 expression. BBX25/STH acts additively with BBX24/STO during de-etiolation and the hypocotyl shade avoidance response (PubMed-23624715) (238 aa)
           
  0.670
LZF1
Light-regulated zinc finger protein 1 (319 aa)
           
  0.670
BBX21
B-box domain protein 21; Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed-17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed-21070414) (331 aa)
           
  0.636
BRM
BRAHMA; ATPase subunit of a multiprotein complex equivalent of the SWI/SNF complex that acts by remodeling the chromatin by catalyzing an ATP-dependent alteration in the structure of nucleosomal DNA. Represses embryonic genes in leaves and controls shoot development and flowering. Activates flower homeotic genes (2193 aa)
       
      0.449
SWI3B
Switch subunit 3; Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors. May play an essential role in the transition from the vegetative to the reproductive phase of development. May be a positive regul [...] (469 aa)
       
      0.449
SWI3C
SWI/SNF complex subunit SWI3C; Component of a multiprotein complex equivalent of the SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors (807 aa)
       
      0.449
AT5G56560
FBD, F-box and leucine rich repeat domain-containing protein (607 aa)
     
        0.438
AT5G49260
Uncharacterized protein (210 aa)
     
        0.438
APRR4
Pseudo-response regulator 4; Transcriptional activator that binds specifically to the DNA sequence 5’-[AG]GATT-3’ (292 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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