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AT5G19730 AT5G19730 AT5G64640 AT5G64640 AT5G51500 AT5G51500 AT5G61680 AT5G61680 QRT1 QRT1 AT1G60590 AT1G60590 PMEPCRF PMEPCRF AT5G09760 AT5G09760 AT5G49180 AT5G49180 AT5G51490 AT5G51490 PME5 PME5
"AT1G60590" - Pectin lyase-like protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
AT1G60590Pectin lyase-like protein (540 aa)    
Predicted Functional Partners:
AT5G19730
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (383 aa)
   
 
  0.786
PME5
Pectin methylesterase 5; Acts in the modification of cell walls via demethylesterification of cell wall pectin (362 aa)
   
 
  0.742
AT5G09760
Putative pectinesterase/pectinesterase inhibitor 51; Acts in the modification of cell walls via demethylesterification of cell wall pectin (551 aa)
   
 
  0.730
AT5G64640
Putative pectinesterase/pectinesterase inhibitor 64; Acts in the modification of cell walls via demethylesterification of cell wall pectin (602 aa)
       
  0.714
AT5G61680
Putative pectinesterase 63; Acts in the modification of cell walls via demethylesterification of cell wall pectin (338 aa)
       
  0.714
QRT1
QUARTET 1; Pectinesterase required for cell type-specific pectin degradation to separate microspores (380 aa)
       
  0.714
PMEPCRF
Pectin methylesterase PCR fragment F; Acts in the modification of cell walls via demethylesterification of cell wall pectin (587 aa)
       
  0.714
AT5G51500
Putative pectinesterase/pectinesterase inhibitor 60; Acts in the modification of cell walls via demethylesterification of cell wall pectin (540 aa)
       
  0.714
AT5G51490
Putative pectinesterase/pectinesterase inhibitor 59; Acts in the modification of cell walls via demethylesterification of cell wall pectin (536 aa)
       
  0.714
AT5G49180
Putative pectinesterase/pectinesterase inhibitor 58 58; Acts in the modification of cell walls via demethylesterification of cell wall pectin (571 aa)
       
  0.714
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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