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VIP4 VIP4 DJ1D DJ1D BZIP53 BZIP53 ATB2 ATB2 AT1G59950 AT1G59950 AT5G63260 AT5G63260 AT4G02950 AT4G02950 AT1G21930 AT1G21930 AT1G52060 AT1G52060 MUB5 MUB5 AT2G29070 AT2G29070
"ATB2" - Encodes ATB2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATB2Encodes ATB2 (345 aa)    
Predicted Functional Partners:
DJ1D
Class I glutamine amidotransferase-like domain-containing protein; Possesses glyoxalase I activity. Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. May be involved in oxidative stress response (388 aa)
   
   
  0.685
AT4G02950
Ubiquitin family protein (318 aa)
       
 
  0.678
AT5G63260
Zinc finger CCCH domain-containing protein 67 (451 aa)
           
  0.678
AT2G29070
Ubiquitin fusion degradation UFD1-like protein (312 aa)
           
  0.677
AT1G21930
Uncharacterized protein (98 aa)
           
  0.677
BZIP53
Basic region/leucine zipper motif 53; Transcription activator that binds DNA to the C-box-like motif (5’-TGCTGACGTCA-3’), ABRE elements, G-box-like motif (5’- CCACGTGGCC-3’), DOF (5’-AAAG-3’), I-box (5’-GATAA-3’), BS1 (5’- AGCGGG-3’), MY3 (5’-CGACG-3’), 5’-CAGTGCGC-3’ and 5’-ACTCAT-3’ sequence in target gene promoters (PubMed-15047879, PubMed-16810321, PubMed-19531597, PubMed-21278122, PubMed-25108460). DNA-binding and subsequent transcription activation is triggered by heterodimerization with other bZIP proteins (e.g. BZIP1, BZIP10 and BZIP25) (PubMed-16810321, PubMed-19531597, PubMed [...] (146 aa)
       
      0.660
AT1G52060
Mannose-binding lectin superfamily protein (314 aa)
           
  0.634
VIP4
Leo1-like family protein; Component of the PAF1 complex (PAF1C) which is involved in histone modifications such as methylation on histone H3 ’Lys-4’ (H3K4me3) (PubMed-20363855). Involved in regulation of flowering time. Required for the expression of the flowering repressor and MADS box gene FLC (PubMed-12207655). Involved in the control of seed dormancy and germination (PubMed-21799800) (625 aa)
       
      0.606
AT1G59950
NAD(P)-linked oxidoreductase-like protein (320 aa)
   
   
  0.602
MUB5
Membrane-anchored ubiquitin-fold protein 5; May serve as docking site to facilitate the association of other proteins to the plasma membrane (120 aa)
           
  0.600
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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