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STRINGSTRING
AGL52 AGL52 AGL78 AGL78 AGL81 AGL81 AGL76 AGL76 AGL55 AGL55 AGL50 AGL50 AT4G32820 AT4G32820 AGL54 AGL54 AGL89 AGL89 AGL101 AGL101 AGL93 AGL93
"AGL55" - AGAMOUS-like 55 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL55AGAMOUS-like 55 (191 aa)    
Predicted Functional Partners:
AGL52
AGAMOUS-like 52 (329 aa)
       
 
  0.843
AGL78
AGAMOUS-like 78 (341 aa)
       
 
  0.823
AGL54
AGAMOUS-like 54 (187 aa)
     
   
  0.749
AGL89
AGAMOUS-like 89 (223 aa)
           
  0.738
AGL101
AGAMOUS-like 101 (120 aa)
           
  0.735
AGL93
AGAMOUS-like 93; Probable transcription factor (289 aa)
           
  0.735
AGL81
AGAMOUS-like 81; Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction (355 aa)
           
  0.734
AGL50
AGAMOUS-like 50 (283 aa)
           
  0.732
AT4G32820
Tetratricopeptide repeat domain-containing protein (1872 aa)
       
  0.723
AGL76
AGAMOUS-like 76 (385 aa)
           
  0.710
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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