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PyrD PyrD At3g47390 At3g47390 AT3G07270 AT3G07270 GCH GCH AT3G54470 AT3G54470 AT1G60990 AT1G60990 NADK3 NADK3 AT4G12130 AT4G12130 AT1G32470 AT1G32470 AT2G35120 AT2G35120 GDCH GDCH
"AT1G60990" - Aminomethyltransferase in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AT1G60990Aminomethyltransferase; Folate-dependent protein involved in Fe/S cluster biogenesis. Functionally complements an E.coli mutant defective in ygfZ (432 aa)    
Predicted Functional Partners:
AT4G12130
Glycine cleavage T-protein family protein; Folate-dependent protein involved in Fe/S cluster biogenesis. Functionally complements an E.coli mutant defective in ygfZ (393 aa)
           
  0.987
At3g47390
PHOTOSENSITIVE 1; Pyrimidine reductase involved in the riboflavin biosynthesis pathway. Has also a non-functional N-terminal deaminase domain that lacks the catalytically essential zinc- binding residues (599 aa)
           
  0.987
PyrD
Pyrimidine deaminase; Monofunctional pyrimidine deaminase involved in the riboflavin biosynthesis pathway. Has also a reductase domain that lacks catalytically essential substrate-binding residues (426 aa)
     
   
  0.882
AT3G07270
GTP cyclohydrolase I; GTP cyclohydrolase 1 is the first enzyme in the biosynthetic pathway leading to folic acid (466 aa)
           
  0.706
GDCH
Glycine decarboxylase complex H; The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (165 aa)
   
 
  0.677
NADK3
NAD(H) kinase 3; Phosphorylates specifically NADH. Can phosphorylate NAD with a 100-fold decrease in efficiency compared to NADH. Prefers ATP as nucleoside triphosphate substrate. Can also utilize UTP, GTP and CTP. Key source of the cellular reductant NADPH which is an important antioxidant factor (317 aa)
           
  0.671
GCH
GTP cyclohydrolase-2; Involved in riboflavin biosynthesis. Catalyzes both the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy- 2-butanone 4-phosphate and the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5’-phosphate (DARP), formate and pyrophosphate. RIBA2 and RIBA3 together are not able to complement the loss of function of RIBA1 (543 aa)
           
  0.670
AT1G32470
Glycine cleavage system H protein; The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (By similarity) (166 aa)
   
 
  0.665
AT2G35120
Glycine cleavage system H protein; The glycine decarboxylase (GDC) or glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (By similarity) (156 aa)
   
   
  0.647
AT3G54470
Orotidine 5’-phosphate decarboxylase (476 aa)
         
  0.643
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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