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AT1G44160 AT1G44160 AT5G14890 AT5G14890 AT3G52460 AT3G52460 AT3G59290 AT3G59290 EXO70C2 EXO70C2 SP1L4 SP1L4 AT1G13970 AT1G13970 GAE2 GAE2 AT2G43220 AT2G43220 RIC1 RIC1 AT1G61080 AT1G61080
"AT1G61080" - Hydroxyproline-rich glycoprotein-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G61080Hydroxyproline-rich glycoprotein-like protein (907 aa)    
Predicted Functional Partners:
EXO70C2
Exocyst complex component 7 (695 aa)
     
        0.436
AT2G43220
Cysteine/Histidine-rich C1 domain family protein (538 aa)
     
        0.436
AT1G44160
HSP40/DnaJ peptide-binding protein (357 aa)
     
        0.436
SP1L4
SPIRAL1-like4; Acts redundantly with SPR1 in maintaining the cortical microtubules organization essential for anisotropic cell growth (127 aa)
     
        0.435
AT3G59290
ENTH/VHS family protein; Binds to membranes enriched in phosphatidylinositol 4,5- bisphosphate (PtdIns(4,5)P2). May have a role in transport via clathrin-coated vesicles from the trans-Golgi network to endosomes. Stimulates clathrin assembly (By similarity) (1024 aa)
     
        0.435
AT3G52460
Hydroxyproline-rich glycoprotein family protein (300 aa)
     
        0.435
GAE2
UDP-D-glucuronate 4-epimerase; Involved in the synthesis of the negatively charged monosaccharide that forms the backbone of pectic cell wall components (434 aa)
     
        0.435
AT5G14890
NHL domain-containing protein (754 aa)
     
        0.433
RIC1
ROP-interactive CRIB motif-containing protein 1; Functions as downstream effector of Rho-related GTP binding proteins of the "Rho of Plants" (ROPs) family. Participates in the propagation of ROP GTPase signals in specific cellular responses. Required for cortical microtubule organization. Promotes microtubule bundling and formation of well- ordered microtubule arrays in the neck region of pavement cells. This restricts cell lateral expansion to generate the narrow neck morphology of pavement cells. Its function is inhibited when it interacts with activated ARAC4/ROP2. Represses ARAC4/R [...] (224 aa)
     
        0.433
AT1G13970
Uncharacterized protein (504 aa)
     
        0.433
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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