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AT5G23430 AT5G23430 DWA3 DWA3 SRF3 SRF3 AT1G11120 AT1G11120 AT5G08390 AT5G08390 AT1G11160 AT1G11160 BRD4 BRD4 GTE6 GTE6 IMB1 IMB1 AT1G05910 AT1G05910 AT1G17790 AT1G17790
"BRD4" - Bromodomain 4 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD4Bromodomain 4 (475 aa)    
Predicted Functional Partners:
GTE6
Transcription factor GTE6 (386 aa)
           
  0.863
IMB1
IMBIBITION-INDUCIBLE 1; Transcription activator that plays a role in the promotion of seed germination by both negatively and positively regulating the abscisic acid (ABA) and phytochrome A (phyA) transduction pathways, respectively (386 aa)
           
  0.676
AT1G05910
Cell division cycle protein 48-like protein (1210 aa)
           
  0.636
AT1G17790
DNA-binding bromodomain-containing protein (487 aa)
     
   
  0.620
DWA3
DWD hypersensitive to ABA 3; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (1181 aa)
     
   
  0.537
AT5G23430
Katanin p80 WD40 repeat-containing subunit B1-1; May participate in a complex which severs microtubules in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays (By similarity) (837 aa)
           
  0.522
AT5G08390
Katanin p80 subunit-like protein; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (839 aa)
           
  0.522
SRF3
STRUBBELIG-receptor family 3; Not essential for epidermal patterning and not redundant with STRUBBELIG (776 aa)
           
  0.522
AT1G11160
WD40 domain-containing protein; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (1021 aa)
           
  0.522
AT1G11120
Uncharacterized protein (187 aa)
           
  0.521
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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