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LAC7 LAC7 AT1G53290 AT1G53290 CHX18 CHX18 AGL16 AGL16 AT3G49510 AT3G49510 AT1G63130 AT1G63130 AT1G61230 AT1G61230 RCK RCK SDE3 SDE3
"AT1G61230" - Mannose-binding lectin superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
AT1G61230Mannose-binding lectin superfamily protein (505 aa)    
Predicted Functional Partners:
AT3G49510
F-box protein (662 aa)
           
  0.863
AT1G53290
Galactosyltransferase family protein; Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue (345 aa)
           
  0.750
CHX18
cation/H+ exchanger 18; May operate as a cation/H(+) antiporter (810 aa)
           
  0.676
AT1G63130
Pentatricopeptide repeat-containing protein (630 aa)
           
  0.637
LAC7
Laccase 7; Lignin degradation and detoxification of lignin-derived products (567 aa)
           
  0.633
RCK
ROCK-N-ROLLERS; DNA helicase required for crossover formation, complete synapsis of homologous chromosomes and bivalent formation during meiosis. Is specific to recombination events resulting in interference-sensitive crossovers (class I meiotic crossover) (1133 aa)
           
  0.477
AGL16
AGAMOUS-like 16; Probable transcription factor (240 aa)
           
  0.448
SDE3
SILENCING DEFECTIVE; Probable RNA helicase required for post-transcriptional gene silencing (PTGS), a process that provides protection in plants against virus infection and can suppress expression of transgenes. Plays a central role in RNA interference (RNAi) process, a process that mediates mRNA destruction of translational repression. Required for the assembly of the RISC complex, a complex required for target RNA destruction or repression. May be required in the RISC assembly to unwind miRNAs, in the production of single-stranded miRNA from the double-stranded miRNA, a key step in R [...] (1002 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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