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AT5G01290 AT5G01290 AT5G63070 AT5G63070 AT5G37150 AT5G37150 AT5G52090 AT5G52090 AT5G66830 AT5G66830 BGLU12 BGLU12 AT5G28210 AT5G28210 AT4G38030 AT4G38030 AT1G61410 AT1G61410 AT5G28220 AT5G28220 AT5G23600 AT5G23600
"AT1G61410" - DNA double-strand break repair and VJ recombination XRCC4 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G61410DNA double-strand break repair and VJ recombination XRCC4 (118 aa)    
Predicted Functional Partners:
AT5G52090
tRNA-splicing endonuclease positive effector-related protein (676 aa)
           
  0.670
AT5G23600
tRNA 2’phosphotransferase (212 aa)
           
  0.670
AT5G66830
Putative F-box protein (394 aa)
           
  0.637
AT5G63070
40S ribosomal protein S15-6 (160 aa)
           
  0.637
BGLU12
Beta glucosidase 12 (507 aa)
           
  0.637
AT5G37150
DEXDc and putative helicase domain-containing protein (839 aa)
           
  0.637
AT5G28220
O-linked GlcNAc transferase-like protein (316 aa)
           
  0.637
AT5G28210
mRNA capping enzyme family protein (625 aa)
           
  0.637
AT5G01290
mRNA capping enzyme family protein (657 aa)
           
  0.637
AT4G38030
Rhamnogalacturonate lyase family protein (667 aa)
           
  0.637
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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