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ADG1 ADG1 AT4G31210 AT4G31210 AT1G62030 AT1G62030 RDR1 RDR1 AT5G02710 AT5G02710 AT2G40720 AT2G40720 ATG18H ATG18H DRIP1 DRIP1 GAD2 GAD2
"AT1G62030" - Cysteine/Histidine-rich C1 domain family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G62030Cysteine/Histidine-rich C1 domain family protein (743 aa)    
Predicted Functional Partners:
AT5G02710
Uncharacterized protein (176 aa)
           
  0.959
ATG18H
Autophagy 18H-like protein; The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Required for autophagy (By similarity) (927 aa)
           
  0.910
AT4G31210
DNA topoisomerase, type IA, core (1284 aa)
           
  0.750
AT2G40720
Pentatricopeptide repeat-containing protein (860 aa)
           
  0.739
GAD2
Glutamate decarboxylase 2; Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (494 aa)
           
  0.679
DRIP1
DREB2A-interacting protein 1; E3 ubiquitin-protein ligase that acts as a negative regulator of the response to water stress. Mediates ubiquitination and subsequent proteasomal degradation of the drought-induced transcriptional activator DREB2A. Functionally redundant with DRIP2 (421 aa)
           
  0.594
ADG1
ADP glucose pyrophosphorylase 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (520 aa)
           
  0.420
RDR1
RNA-dependent RNA polymerase 1; RNA-dependent direct polymerase involved in antiviral silencing. Required for the production of some small RNAs (mainly 21 and some 22 nucleotides) derived from the crucifer-infecting tobamovirus (TMV-cg). Required for turnip mosaic virus (TuMV) silencing and accumulation of viral siRNAs. Involved in cucumber mosaic virus (CMV) silencing. Required for the biogenesis of viral secondary siRNAs, process that follows the production of primary siRNAs derived from viral RNA replication. Specifically targets the positive-strand of the 3 RNA genomes of CMV and p [...] (1107 aa)
           
  0.420
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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