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AT3G13150 AT3G13150 EMB1025 EMB1025 AT3G13880 AT3G13880 AT3G02490 AT3G02490 PPR336 PPR336 AT1G62085 AT1G62085 AT1G09220 AT1G09220 AT4G02820 AT4G02820 AT2G37310 AT2G37310 AT2G40720 AT2G40720 AT2G16880 AT2G16880
"AT1G62085" - Mitochondrial transcription termination factor family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G62085Mitochondrial transcription termination factor family protein (461 aa)    
Predicted Functional Partners:
AT2G40720
Pentatricopeptide repeat-containing protein (860 aa)
     
 
  0.534
AT3G13150
Pentatricopeptide repeat-containing protein (551 aa)
     
 
  0.533
PPR336
Pentatricopeptide repeat 336; May be involved in translation through its association with polysomes. Could bind RNA (408 aa)
     
 
  0.530
AT2G37310
Pentatricopeptide repeat-containing protein (657 aa)
     
 
  0.529
AT3G02490
Pentatricopeptide repeat-containing protein (665 aa)
     
 
  0.528
AT2G16880
Pentatricopeptide repeat-containing protein (743 aa)
     
 
  0.528
AT3G13880
Pentatricopeptide repeat-containing protein (748 aa)
     
 
  0.525
AT1G09220
Pentatricopeptide repeat-containing protein (504 aa)
       
 
  0.514
EMB1025
Embryo defective 1025; May play a role in embryogenesis (660 aa)
       
 
  0.513
AT4G02820
Pentatricopeptide repeat-containing protein (532 aa)
       
 
  0.513
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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