Full Link:
STRINGSTRING
SDG40 SDG40 RCI1A RCI1A PRMT7 PRMT7 AT3G27200 AT3G27200 PFA-DSP5 PFA-DSP5 AT1G53190 AT1G53190 AT1G62590 AT1G62590 GolS4 GolS4 AT1G64620 AT1G64620 ATP6-1 ATP6-1 TRZ1 TRZ1
"AT1G62590" - Encodes a functional adenylate cyclase in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G62590Encodes a functional adenylate cyclase (634 aa)    
Predicted Functional Partners:
AT1G53190
RING/U-box superfamily protein (494 aa)
           
  0.861
AT1G64620
Dof zinc finger protein DOF1.8; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence (352 aa)
           
  0.801
PFA-DSP5
Tyrosine specific protein phosphatase family protein (204 aa)
           
  0.740
AT3G27200
Cupredoxin superfamily protein (174 aa)
           
  0.739
PRMT7
Protein arginine methyltransferase 7; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA) (724 aa)
           
  0.737
SDG40
SET domain group 40 (491 aa)
     
   
  0.687
RCI1A
General regulatory factor 3; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes (PubMed-7972511, PubMed-7870824, PubMed-16407442). Involved in the regulation of nutrient metabolism (PubMed-22104211, PubMed-21094157). Reciprocal negative transcription regulation of miR396 (PubMed-22751317). Negative regulator of constitutive freezing tolerance and cold acclimation by controlling cold-induced gene expression partially through an ethylene (ET)-dependent pathway; prevents ethylene (ET) biosynthesis, [...] (255 aa)
           
  0.552
ATP6-1
ATPase subunit 6; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to [...] (385 aa)
           
  0.529
TRZ1
tRNAse Z1; Zinc phosphodiesterase, which displays some tRNA 3’- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3’-trailer from precursor tRNA (280 aa)
           
  0.491
GolS4
Galactinol synthase 4; Galactinol synthase involved in the biosynthesis of raffinose family oligosaccharides (RFOs) that function as osmoprotectants. May promote plant stress tolerance (By similarity) (334 aa)
           
  0.491
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (2%)