Full Link:
STRINGSTRING
AT5G42310 AT5G42310 AT1G63720 AT1G63720 AT1G63740 AT1G63740 AT1G63830 AT1G63830 AT1G63430 AT1G63430 SPPL2 SPPL2 TRM12 TRM12 AT5G17680 AT5G17680 AT1G27170 AT1G27170 AT1G12290 AT1G12290 AT1G56540 AT1G56540
"TRM12" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM12Uncharacterized protein (689 aa)    
Predicted Functional Partners:
AT1G63830
PLAC8-like protein (232 aa)
           
  0.869
AT1G63720
Uncharacterized protein (358 aa)
           
  0.869
AT1G63740
TIR-NBS-LRR class disease resistance protein (992 aa)
           
  0.867
SPPL2
SIGNAL PEPTIDE PEPTIDASE-LIKE 2; Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane (540 aa)
     
   
  0.811
AT1G63430
Leucine-rich repeat protein kinase family protein (688 aa)
           
  0.809
AT1G27170
Transmembrane receptors;ATP binding (1384 aa)
           
  0.749
AT5G42310
Pentatricopeptide repeat-containing protein (709 aa)
           
  0.745
AT1G12290
CC-NBS-LRR class disease resistance protein; Probable disease resistance protein (884 aa)
           
  0.717
AT1G56540
TIR-NBS-LRR class disease resistance protein (1096 aa)
           
  0.675
AT5G17680
Putative TIR-NBS-LRR class disease resistance protein (1294 aa)
           
  0.671
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (1%)