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UBA2 UBA2 ATG8C ATG8C ATG8E ATG8E UBC6 UBC6 ATG8F ATG8F UBC5 UBC5 J8 J8 AT4G19860 AT4G19860 AT1G19660 AT1G19660 AT1G15740 AT1G15740 AT2G04690 AT2G04690
"UBC5" - Ubiquitin-conjugating enzyme 5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC5Ubiquitin-conjugating enzyme 5; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (185 aa)    
Predicted Functional Partners:
ATG8F
Autophagy 8f; Ubiquitin-like modifier involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton (By similarity) (121 aa)
     
        0.906
UBC6
Ubiquitin-conjugating enzyme 6; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (183 aa)
     
 
0.848
AT1G19660
Wound-responsive family protein; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen (By similarity) (329 aa)
     
        0.829
AT2G04690
Pyridoxamine 5’-phosphate oxidase family protein (210 aa)
     
        0.772
AT1G15740
Leucine-rich repeat family protein (585 aa)
     
        0.704
J8
Chaperone protein dnaJ 8; Have a continuous role in plant development probably in the structural organization of compartments (163 aa)
     
   
  0.691
ATG8E
AUTOPHAGY 8E; Ubiquitin-like modifier involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton (By similarity) (122 aa)
     
        0.677
AT4G19860
Lecithine-cholesterol acyltransferase-like 4 (535 aa)
     
        0.673
ATG8C
Autophagy 8c; Ubiquitin-like modifier involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton (By similarity) (133 aa)
     
        0.668
UBA2
Ubiquitin activating enzyme 2; Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin- E1 thioester and free AMP (1077 aa)
     
 
  0.663
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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