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PSRP3/1 PSRP3/1 EMB3126 EMB3126 AT2G43030 AT2G43030 PSRP2 PSRP2 PRPS20 PRPS20 AT5G47190 AT5G47190 RPS9 RPS9 AT1G64510 AT1G64510 AT1G29070 AT1G29070 PSRP4 PSRP4 RPS17 RPS17
"AT1G64510" - 30S ribosomal protein S6 alpha in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G6451030S ribosomal protein S6 alpha; Binds together with S18 to 16S ribosomal RNA (207 aa)    
Predicted Functional Partners:
RPS9
Ribosomal protein S9; Binds directly to 16S ribosomal RNA (208 aa)
     
   
  0.962
PSRP4
30S ribosomal protein S31 (118 aa)
     
   
  0.961
RPS17
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (By similarity). Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed-22900828) (149 aa)
     
   
  0.951
PSRP2
RNA recognition motif-containing protein (253 aa)
     
   
  0.931
EMB3126
EMBRYO DEFECTIVE 3126; This protein binds directly to 23S ribosomal RNA (346 aa)
     
   
  0.922
PSRP3/1
30S ribosomal protein 3-1; Probably a ribosomal protein or a ribosome-associated protein (166 aa)
   
        0.896
PRPS20
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (202 aa)
     
        0.882
AT2G43030
50S ribosomal protein L3-1; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (271 aa)
     
        0.877
AT1G29070
Ribosomal protein L34; This protein binds directly to 23S ribosomal RNA (157 aa)
     
        0.877
AT5G47190
50S ribosomal protein L19-2; Located at the 30S-50S ribosomal subunit interface and binds directly to 23S ribosomal RNA (229 aa)
     
        0.874
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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