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AT5G16070 AT5G16070 EIF3A EIF3A AT1G57720 AT1G57720 AT1G09640 AT1G09640 ABCE2 ABCE2 ABCF3 ABCF3 ILA ILA PCN PCN GCN2 GCN2 AT1G27470 AT1G27470 AT1G53880 AT1G53880
"ABCF3" - ATP-binding cassette F3 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF3ATP-binding cassette F3 (715 aa)    
Predicted Functional Partners:
AT1G09640
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (414 aa)
     
 
  0.942
AT1G57720
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
 
  0.938
AT1G53880
Eukaryotic translation initiation factor 2B-like protein (580 aa)
     
 
  0.875
ILA
ILITYHIA (2696 aa)
     
 
  0.842
PCN
POPCORN (815 aa)
     
      0.818
AT1G27470
Transducin family protein / WD-40 repeat family protein (810 aa)
     
      0.806
GCN2
GENERAL CONTROL NON-REPRESSIBLE 2; Metabolic-stress sensing protein kinase that phosphorylates the alpha subunit of eukaryotic translation initiation factor 2 eIF-2-alpha in response to low amino acid availability. Plays a role as an activator of the general amino acid control pathway required for adapatation to amino acid starvation. Converts phosphorylated eIF-2-alpha either to a competitive inhibitor of translation initiation, leading to a global protein synthesis repression, and thus to a reduced overall utilization of amino acids, or to a translational initiation activation of spe [...] (1265 aa)
   
 
  0.796
ABCE2
ATP-binding cassette E2 (605 aa)
     
 
  0.745
AT5G16070
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (535 aa)
     
      0.735
EIF3A
Eukaryotic translation initiation factor 3A; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (987 aa)
     
      0.729
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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