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AT5G08240 AT5G08240 DAU2 DAU2 HAP2 HAP2 MGH3 MGH3 DUO3 DUO3 GEX2 GEX2 DUO1 DUO1 AT2G17410 AT2G17410 AT4G21903 AT4G21903 FBL17 FBL17 AT2G46040 AT2G46040
"DUO3" - DUO POLLEN 3 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUO3DUO POLLEN 3 (1239 aa)    
Predicted Functional Partners:
DUO1
DUO POLLEN 1 (297 aa)
     
   
  0.858
GEX2
Gamete expressed 2 (914 aa)
           
  0.810
HAP2
HAPLESS 2; Involved in male fertility. Essential for pollen tube guidance, successful gamete attachment and fertilization (705 aa)
           
  0.781
FBL17
F-box/LRR-repeat protein 17; Essential protein for male fertility. Component of the SCF(ASK-cullin-F-box) E3 ubiquitin ligase complex SCF(FBL17), which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Enables the switch in cell cycle control leading to male germ cell lineage formation from microspores after meiosis. Targets CDKA-1 inhibitors the degradation specifically in male germ cells (e.g. KRP6 and KRP7) and thus enables CDKA-1 activation and germ cell S-phase progression. Promotes twin sperm cell production and double fertilization (593 aa)
           
  0.739
AT2G17410
ARID/BRIGHT DNA-binding domain-containing protein (786 aa)
     
   
  0.732
AT4G21903
MATE efflux family protein (517 aa)
           
  0.670
AT2G46040
ARID/BRIGHT DNA-binding domain;ELM2 domain protein (562 aa)
           
  0.670
MGH3
Histone H3; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity) (137 aa)
           
  0.670
DAU2
Uncharacterized protein (244 aa)
           
  0.636
AT5G08240
Uncharacterized protein (258 aa)
           
  0.636
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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