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AT3G59450 AT3G59450 AT4G31000 AT4G31000 AT1G64610 AT1G64610 AT5G52760 AT5G52760 AT2G32030 AT2G32030 AT4G38560 AT4G38560 AT5G41750 AT5G41750 AT1G51890 AT1G51890 AT2G24300 AT2G24300 AGP5 AGP5 SARD1 SARD1
"AT1G64610" - WD40 domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G64610WD40 domain-containing protein (647 aa)    
Predicted Functional Partners:
AT2G32030
GCN5-related N-acetyltransferase-like protein (188 aa)
     
   
  0.882
AT5G52760
Copper transport family protein (126 aa)
     
   
  0.784
AT1G51890
Putative leucine-rich repeat protein kinase (876 aa)
     
   
  0.768
AT4G38560
Phospholipase like protein (PEARLI 4) (523 aa)
     
   
  0.762
SARD1
SAR Deficient 1; Transcription activator that binds DNA in a sequence- specific manner, 5’-GAAATTTTGG-3’, to promote the expression of target genes (PubMed-20921422, PubMed-21615571, PubMed-23153277). Recruited to the promoter of ICS1 and other defense-related genes (e.g. PR1 and SID2) in response to both biotic (e.g. Pseudomonas syringae pv. maculicola ES4326) and abiotic stresses (e.g. UV-B), thus triggering slow defense responses by stimulating salicylic acid (SA) biosynthesis. Required for basal and systemic acquired resistance to P. syringae pv. maculicola and Hyaloperonospora ara [...] (451 aa)
     
   
  0.699
AT5G41750
TIR-NBS-LRR class disease resistance protein (1068 aa)
     
   
  0.695
AGP5
Arabinogalactan protein 5; Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death (133 aa)
     
   
  0.685
AT4G31000
Calmodulin-binding protein; Transcription activator that binds DNA in a sequence- specific manner, likely 5’-GAAATTTTGG-3’, to promote the expression of target genes (562 aa)
           
  0.674
AT2G24300
Calmodulin-binding protein; Transcription activator that binds DNA in a sequence- specific manner, likely 5’-GAAATTTTGG-3’, to promote the expression of target genes (599 aa)
           
  0.674
AT3G59450
Calcium-binding EF-hand family protein; Potential calcium sensor (148 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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