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AT1G64580 AT1G64580 OTP85 OTP85 AT1G63080 AT1G63080 AT1G63230 AT1G63230 AT1G63070 AT1G63070 AT1G64620 AT1G64620 AT1G62680 AT1G62680 AT1G62910 AT1G62910 AT3G43430 AT3G43430 AT1G62590 AT1G62590 NAC020 NAC020
"AT1G64620" - Dof zinc finger protein DOF1.8 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
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Textmining
[Homology]
Score
AT1G64620Dof zinc finger protein DOF1.8; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence (352 aa)    
Predicted Functional Partners:
AT3G43430
RING/U-box superfamily protein (167 aa)
           
  0.911
AT1G64580
Pentatricopeptide repeat-containing protein (523 aa)
           
  0.866
AT1G62680
Pentatricopeptide repeat-containing protein (548 aa)
           
  0.866
AT1G63070
Pentatricopeptide repeat-containing protein (590 aa)
           
  0.841
NAC020
NAC domain containing protein 20 (301 aa)
           
  0.841
AT1G63230
Pentatricopeptide repeat-containing protein (323 aa)
           
  0.807
AT1G62590
Encodes a functional adenylate cyclase (634 aa)
           
  0.801
AT1G63080
Pentatricopeptide repeat-containing protein (614 aa)
           
  0.731
AT1G62910
Pentatricopeptide repeat-containing protein (632 aa)
           
  0.710
OTP85
ORGANELLE TRANSCRIPT PROCESSING 85; Involved in RNA editing event in chloroplasts. Required for the editing of a single site in ndhD transcript, which is a plastid-encoded subunits of the chloroplast NAD(P)H dehydrogenase (NDH) complex. Not essential for the activity of the NDH complex of the photosynthetic electron transport chain (603 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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