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CHLM CHLM AT2G46220 AT2G46220 AT5G04050 AT5G04050 AT1G16080 AT1G16080 PUX4 PUX4 CP5 CP5 AT2G24420 AT2G24420 AT4G15790 AT4G15790 AT1G08590 AT1G08590 AT1G72480 AT1G72480 AT1G33330 AT1G33330
"CP5" - Membrane related protein CP5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CP5Membrane related protein CP5 (385 aa)    
Predicted Functional Partners:
AT1G33330
Class I peptide chain release factor (257 aa)
           
  0.736
AT1G72480
Lung seven transmembrane receptor-like protein (509 aa)
           
  0.676
AT4G15790
Uncharacterized protein (147 aa)
           
  0.649
AT1G16080
Uncharacterized protein (313 aa)
           
  0.649
AT2G24420
DNA repair ATPase-related (440 aa)
           
  0.641
AT5G04050
RNA-directed DNA polymerase (reverse transcriptase) (695 aa)
           
  0.632
CHLM
Magnesium-protoporphyrin IX methyltransferase; Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor. Involved in chloroplast-to-nucleus signaling by acting as a negative effector of nuclear photosynthetic gene expression (312 aa)
     
        0.610
AT2G46220
Uncharacterized protein (241 aa)
     
        0.607
PUX4
UBX domain containing protein 4 (303 aa)
           
  0.558
AT1G08590
Leucine-rich receptor-like protein kinase-like protein; Involved in the regulation of procambium maintenance and polarity during vascular-tissue development (PubMed-17570668). Phosphorylates HIRD11 and LHCA1 in vitro (PubMed-25602612) (1029 aa)
       
      0.542
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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