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RPS5B RPS5B rps2 rps2 RPS7.2 RPS7.2 At5g47320 At5g47320 AT1G64880 AT1G64880 AT4G30800 AT4G30800 RPS11 RPS11 RPS9 RPS9 AT3G49080 AT3G49080 At3g03600 At3g03600 RPS7 RPS7
"AT1G64880" - Ribosomal protein S5 family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G64880Ribosomal protein S5 family protein (515 aa)    
Predicted Functional Partners:
AT3G49080
Small subunit ribosomal protein S9 (430 aa)
   
  0.999
RPS9
Ribosomal protein S9; Binds directly to 16S ribosomal RNA (208 aa)
   
  0.999
At3g03600
Ribosomal protein S2 (219 aa)
   
  0.999
At5g47320
Ribosomal protein S19; The RNA-binding domain found in RPS19 may functionally replaces the missing mitochondrial RPS13 (212 aa)
   
  0.999
RPS5B
Ribosomal protein 5B (207 aa)
   
  0.999
AT4G30800
40S ribosomal protein S11-2 (159 aa)
   
  0.999
RPS11
Ribosomal protein S11 (138 aa)
   
  0.999
rps2
Ribosomal protein S2 (236 aa)
   
  0.999
RPS7
Mitochondrial ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 18S rRNA where it nucleates assembly of the head domain of the small subunit (148 aa)
   
  0.999
RPS7.2
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit (155 aa)
   
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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