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STRINGSTRING
AT5G49540 AT5G49540 AT3G04830 AT3G04830 AT2G25310 AT2G25310 AT5G28220 AT5G28220 AT1G65270 AT1G65270 emb2731 emb2731 AT5G51620 AT5G51620 AT5G10780 AT5G10780 AT4G32130 AT4G32130 AT4G12590 AT4G12590
"AT1G65270" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G65270Uncharacterized protein (292 aa)    
Predicted Functional Partners:
AT4G32130
Uncharacterized protein (202 aa)
     
 
  0.794
AT2G25310
Uncharacterized protein (210 aa)
     
 
  0.794
emb2731
Embryo defective 2731 (208 aa)
       
 
  0.730
AT5G51620
Uncharacterized protein (68 aa)
       
 
  0.730
AT4G12590
Uncharacterized protein (246 aa)
     
 
  0.705
AT3G04830
Prenylyltransferase-like protein (303 aa)
     
 
  0.693
AT5G28220
O-linked GlcNAc transferase-like protein (316 aa)
     
 
  0.677
AT5G49540
Rab5-interacting family protein (114 aa)
     
   
  0.436
AT5G10780
Uncharacterized protein (187 aa)
     
   
  0.410
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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