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PUM9 PUM9 AT3G62950 AT3G62950 AT2G17880 AT2G17880 SCA3 SCA3 CRL1 CRL1 AT1G65500 AT1G65500 AT5G19120 AT5G19120 CRL CRL AT1G12010 AT1G12010 MSL3 MSL3 HIS1-3 HIS1-3
"AT1G65500" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G65500Uncharacterized protein (86 aa)    
Predicted Functional Partners:
AT5G19120
Aspartyl protease family protein (386 aa)
           
  0.956
PUM9
Pumilio 9; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (564 aa)
           
  0.740
AT2G17880
Chaperone DnaJ-domain superfamily protein (160 aa)
           
  0.738
AT3G62950
glutaredoxin-C11; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) (103 aa)
           
  0.670
AT1G12010
Aminocyclopropanecarboxylate oxidase; Enzyme involved in the ethylene biosynthesis. May promote stem elongation by maximizing the extensibility cells, possibly by activating ethylene biosynthesis, in response to very- long-chain fatty acids (VLCFAs C20-0 to C30-0) (320 aa)
           
  0.637
CRL1
CCR(Cinnamoyl coA-NADP oxidoreductase)-like 1 (321 aa)
           
  0.631
SCA3
SCABRA 3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (993 aa)
           
  0.605
MSL3
MSCS-like 3; Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer. Controls plastid size, shape, and perhaps division during normal plant development by altering ion flux in response to changes in membrane tension. Acts as a component of the chloroplast division machinery (678 aa)
           
  0.603
CRL
CRUMPLED LEAF; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins (By similarity). Required for plastid division, and involved in cell differentiation and regulation of the cell division plane. Maintenance of plastid homeostasis controls plant preconditioning to stress and stress acclimation (269 aa)
           
  0.600
HIS1-3
Histone H1-3 (167 aa)
           
  0.559
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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